![]() ![]() Move to the beginning of a line, and use d) to delete to the end of the sentence (a bash loop counts as a sentence).If at the end of a line, d0 will delete to the beginning.Move to the beginning of a line and use d$ to delete to the end of a line.To delete these lines, press Escape to go back into command mode and: Turns out there’s not really any data in that directory - I don’t want to run FastQC on it anymore. This goes for anything on the terminal highlight to copy, right click to paste. If you want to copy things from the vim document to elsehwere in the vim document, simply highlight it - it copies automatically - then move to the line where you want to paste it and right click. # Copy the text below, then right click in your terminal with vim (in insert mode) to paste it there for data in /RAW/Lappan/totally_real_data/ *.fastq Move to the directory (with the cd command) where you want to make the file, then type: Let’s start by creating a little bash script with vim. For a list of the commands I cover, skip to the end of the post.īefore we start - if keys are pushed and vim won’t let you leave, simply hit the Escape key and then enter :q to quit. Vim has modes, and if you’re pressing the wrong keys in the wrong mode you might have found yourself stuck in vim.Īt the moment, I know the bare minimum basics of vim - so in this blog post, let’s learn some vim together. If you tried using vim, you may have noticed that it’s not as straightforward to use. I started with nano, as it is quite straightforward to use - but then I moved to vim (probably because it had lots of colours). ![]() I have seen that many people have their preference for nano, emacs or vim. Using a Unix-based text editor is also good practice for getting used to the environment if you are new to the command line. When learning bioinformatics, you will perhaps need to create or edit text files, shell scripts or Python scripts from the command line. Text editing from the command line with vim ![]()
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